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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015874794.1_cds_XP_016435622.1_31562
CDS Infomation

[gene=LOC107761847] [db_xref=GeneID:107761847] [protein=uncharacterized protein sll1770-like isoform X2] [protein_id=XP_016435622.1] [location=complement(join(28489..28614,28722..28820,28909..28963,29067..29127,29214..29294,29592..29716,31263..31351,31459..31528,31625..31698,32848..32917,33164..33243,33339..33449,34282..34380,34757..34857,34970..35090,35974..36140,36890..37025,38480..38818,38849..38986))] [gbkey=CDS]
Sequence

ATGGCGAGTATTTCAGCTACACTTTCCACTGCAACTCTACCAGAGCTCAAATTTCTGTGT
TCAAATTCAGCTTCTAGAAGCTTCCGTGTACCGCTCTCTAGGTTTTCATCGCGTCGGCGG
AGTTTGATTCGAATTAAGGCGGTGAAGAGAGAAGAGAGTGCGGTAGTGGAAGAGAGGGAT
GCGGAATTGGTGAGGAAAGTGAACGGTAGTGTGAATGGAAGTGTGAAGAAGATCGATGAT
TTGAACGGTGCATTGTTAGTGGAGAAGTACACGAATGGTAGTGTAGGTGTGAGTGAGAGT
GAAAATGAGAGTTTGATGAAGTATGTGAATGGGAATGGGAATGGTGTAGCGGCGAAGAGT
AGGGACGAGGTTGTGGAGGTGAAGGCGGAAGAGGTGGTTGAGAAGAAGGAGAAGAAGCAG
AGTGTAGAGGAGATTGGACAAGAGGAAGCTTGGTTTAAGAAGAATGATCAAGTTGAGGTT
TCTGTCCGGCCTGGAGGCCGTTGGAACAGATTCAAAACATATTCAACAATTCAAAGGACT
TTGGAGATATGGGGATCTGTTTTCACTTTTATATTTAGGGCTTGGCTGAATAATCAAAAG
TTCTCTTATCGAGGTGGAATGACAGAGGCGAAAAAAGCTGAGCGGAGAAAGGTACTCGCT
AGGTGGTTAAAAGAAACTATTTTGAGATTAGGTCCTACTTTTATCAAAATTGGCCAGCAA
TTCTCAACAAGGGTGGATATTCTTGCTCAAGAGTATGTTGATCAGTTGTCTGAGCTTCAG
GATCAAGTTCCTCCTTTCCCATCGGAAACTGCTGTATTAATAGTTGAAGAAGAACTTGGG
GGCCCATTGGGTGATGTATTTGAAAGATTTGACCGTGAACCAATAGCTGCTGCAAGTCTT
GGTCAGGTGCATCGTGCAAGATTGAATGGGCAGGAAGTAGTTGTAAAAGTACAGAGGCCC
GGTCTTAAGGATCTTTTTGATATCGATCTTAAAAACCTGAGGGTGATAGCTGAATATCTG
CAGAAAATAGATCCTAAATCTGATGGTGCAAAAAGAGACTGGGTTGCAATATATGATGAA
TGTGCAAGTGTCTTGTATCAGGAGATTGATTACACTAAGGAAGCTGCTAACGCCGAACTG
TTTGCAAGTAACTTCAAGAACATGGATTATGTGAAAGTCCCAACGATATACTGGGAATAT
ACCACACCACAGGTTTTGACAATGGAGTATGTCCCAGGCATTAAAATAAACAGGATACAA
GCCTTAGATCAATTGGGTGTTGATAGGAAAAGGTTAGGGAGGTATGCGGTTGAATCCTAT
CTGGAGCAGATCCTGTCTCATGGCTTTTTCCATGCTGATCCACATCCTGGAAATATAGCT
GTGGATGATGTCAATGGCGGAAGGCTGATCTTTTATGATTTTGGAATGATGGGAAGTATA
AGTCCTAATATCAGAGAAGGATTGCTGGAAACATTCTATGGAGTTTATGAGAAAGATCCA
GATAAGGTCGTGCAAGCAGCGATTCAAATGGGTGTTCTGGTGCCTACTGGTGACATGACT
GCTGTCAGACGAACTGCACAGTTTTTCCTTAATAGTTTTGAAGAGCGCCTTGCAGCACAA
AGAAAGGAGAGAGAAATGGCACAAGCAGAACTTGGGTTCAAAAAGCCATTAAGCAAGGAG
GAACAAATAGAGAAAAAGAAGCAACGGTTGGCTGCAATTGGTGAAGATCTATTAAGCATT
GCAGCAGATCAGCCATTCCGATTTCCTGCCACATTCACTTTTGTGGTTAGAGCATTTTCA
GTTCTGGATGGCATCGGAAAGGGTCTTGATCCACGATTTGATATCACCGAGATTGCCAAA
CCCTATGCCCTAGAGTTGCTTAGGTTTCGTGAAGCTGGTGTTGAAGTTGTGCTAAAGGAC
TTCAGGAACAGATGGGACAGACAATCTCGTGCATTTTACAACTTGTTCAGGCAGGCTGAT
AGAGTTGAGAGACTTGCTGAAATTATCCAGCGATTGGAGCAAGGCGATCTTAAGCTTCGG
GTTAGAGCTTTAGAATCTGAAAGGGCTTTCCAACGTGTTGCAGCTGTCCAGAAAACTATT
GGAAGTGTAAGTTCATACATTCTGGTGCAGTTTTCAAATTAA

Peptide Sequence

PEP ID

XP_016435622.1
PEP Infomation

PREDICTED: uncharacterized protein sll1770-like isoform X2 [Nicotiana tabacum]
Sequence

MASISATLSTATLPELKFLCSNSASRSFRVPLSRFSSRRRSLIRIKAVKREESAVVEERD
AELVRKVNGSVNGSVKKIDDLNGALLVEKYTNGSVGVSESENESLMKYVNGNGNGVAAKS
RDEVVEVKAEEVVEKKEKKQSVEEIGQEEAWFKKNDQVEVSVRPGGRWNRFKTYSTIQRT
LEIWGSVFTFIFRAWLNNQKFSYRGGMTEAKKAERRKVLARWLKETILRLGPTFIKIGQQ
FSTRVDILAQEYVDQLSELQDQVPPFPSETAVLIVEEELGGPLGDVFERFDREPIAAASL
GQVHRARLNGQEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDE
CASVLYQEIDYTKEAANAELFASNFKNMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQ
ALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI
SPNIREGLLETFYGVYEKDPDKVVQAAIQMGVLVPTGDMTAVRRTAQFFLNSFEERLAAQ
RKEREMAQAELGFKKPLSKEEQIEKKKQRLAAIGEDLLSIAADQPFRFPATFTFVVRAFS
VLDGIGKGLDPRFDITEIAKPYALELLRFREAGVEVVLKDFRNRWDRQSRAFYNLFRQAD
RVERLAEIIQRLEQGDLKLRVRALESERAFQRVAAVQKTIGSVSSYILVQFSN

Transcript Sequence

Gene sequence data has not been registered.